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model_examples [2012/01/18 18:14] admin |
model_examples [2019/07/09 19:48] hermann [Additional models] |
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| ====== Model Examples ====== | ====== Model Examples ====== | ||
| - | |||
| - | FIXME Version 1.9.0 uses the extension "egoml" instead of "xml". However, the map format is the same. | ||
| ===== Additional models ===== | ===== Additional models ===== | ||
| Line 9: | Line 7: | ||
| * [[variable time step net transition rates|Calculate variable time-step net transition rates]] | * [[variable time step net transition rates|Calculate variable time-step net transition rates]] | ||
| - | * [[Raster Cube|Create raster cube]] (FIXME Distributed as part of Dinamica 1.9.0) | ||
| - | | ||
| - | ===== Models distributed as part of Dinamica EGO's Examples ===== | ||
| - | |||
| - | ==== Basic Examples ==== | ||
| - | |||
| - | === Patterns of Change === | ||
| - | |||
| - | * h0\h0.egoml | ||
| - | * h1\h1.egoml | ||
| - | * h2\h2.egoml | ||
| - | * h3\h3.egoml | ||
| - | * h4\h4.egoml | ||
| - | * h5\h5.egoml | ||
| - | * h7\h7.egoml | ||
| - | * h9\h9.egoml | ||
| - | * h10\h10.egoml | ||
| - | * h11\h11.egoml | ||
| - | * h12\h12.egoml | ||
| - | * h13\h13.egoml | ||
| - | * h14\h14.egoml | ||
| - | * h15\h15.egoml | ||
| - | |||
| - | === Setup, Run and Validate a LUCC Model === | ||
| - | |||
| - | * 1_transition_matrix_calculation\determine_transition_matrix.egoml | ||
| - | * 2_weights_of_evidence_ranges_calculation\determine_weights_of_evidence_ranges.egoml | ||
| - | * 3_and_2_weights_of_evidence_ranges_and_coefficient_calculation\determine_weights_of_evidence_ranges_and_coefficients.egoml | ||
| - | * 3_weights_of_evidence_coefficient_calculation\determine_weights_of_evidence_coefficients.egoml | ||
| - | * 4_weights_of_evidence_correlation\weights_of_evidence_correlation.egoml | ||
| - | * 5_run_lucc\simulate_deforestation_from_1997_2000_no_patch_formation.egoml | ||
| - | * 6_validate_using_exponential_decay_function\determine-similarity-of-differences.egoml | ||
| - | * 7_validate_using_multiple_windows_constant_decay_function\determine-muti-window-similarity-of-differences.egoml | ||
| - | * 7_validate_using_multiple_windows_constant_decay_function\determine-muti-window-similarity-of-differences_complete.egoml | ||
| - | * 8_run_lucc_with_patch_formation\simulate_deforestation_from_1997_2000_with_patch_formation.egoml | ||
| - | * 9_run_lucc_with_patch_formation_and_expansion\simulate_deforestation_from_1997_2000_with_patch_formation_and_expansion.egoml | ||
| - | * 10_run_deforestation_trajectories\simulate_deforestation_from_1997_2000_30years_ahead.ego | ||
| - | * 10_run_deforestation_trajectories\simulate_deforestation_from_1997_2000_30years_ahead.egoml | ||
| - | |||
| - | === Game of Life ==== | ||
| - | |||
| - | * game_of_life.egoml | ||
| - | |||
| - | === Various Applications === | ||
| - | |||
| - | * apply-edge-detection-convolution-easier.egoml | ||
| - | * apply-edge-detection-convolution.egoml | ||
| - | * calculate-road-density.egoml | ||
| - | * [[Raster Cube|create-raster-cube.ego]]: Model used to construct raster cubes from a set of individual layers. (FIXME Distributed as part of Dinamica 1.9.0) | ||
| - | * gcd-using-dowhile-and-new-calculate-map-EXPERIMENTAL.ego | ||
| - | * gcd-using-dowhile.ego | ||
| - | * gcd-using-while-and-new-calculate-map-EXPERIMENTAL.ego | ||
| - | * gcd-using-while.ego | ||
| - | * generate-triangular-probability-distribution.egoml | ||
| - | |||
| - | === LUCC Northen Mato Grosso ==== | ||
| - | |||
| - | * run\mato_grosso.egoml | ||
| - | * run_roads\mato_grosso_road.egoml | ||
| - | * run_roads_with_comments\mato_grosso_road.egoml | ||
| - | * run_roads_with_comments\road_constructor.xml | ||
| - | * run_roads_with_comments_and_workdirs\mato_grosso_road_with_workdirs.egoml | ||
| - | * run_roads_wizard\land_change_and_road_constructor_model.egoml | ||
| - | * run_with_comments\mato_grosso.egoml | ||
| - | |||
| - | === Urban Dynamics of Savassi - BH === | ||
| - | |||
| - | * project_changes_to_2020\savassi2020.egoml | ||
| - | * simulate_2003\savassi2003.egoml | ||
| - | * validate\compare_1996_to_2003.egoml | ||
| - | * validate\compare_1996_to_2003_map_of_changes.egoml | ||
| - | * validate\compare_2003_to_2003_simulated.egoml | ||
| - | |||
| - | === REDD Case Study === | ||
| - | |||
| - | * carbon_bookeeping_model.egoml | ||
| - | * simulate_deforestation_under_socioeconomic_scenarios.egoml | ||
| - | | ||
| - | === Genetic Algorithm === | ||
| - | |||
| - | * GAknn\Reciprocal_fitness1x1\GAReciprocal_fitness1x1.ego | ||
| - | * GAknn\Reciprocal_fitness1x1\validation_fitness1x1.ego | ||
| - | * GALimitedRanges120\Reciprocal_fitness1x1\GAReciprocal_fitness1x1.ego | ||
| - | * GALimitedRanges120\Reciprocal_fitness1x1\validation_fitness1x1.ego | ||
| - | * WEofE\Cal_Reciprocal_fitness1x1.ego | ||
| - | * WEofE\validation_fitness1x1.ego | ||
| - | | ||
| - | === Landscape Metrics ==== | ||
| - | |||
| - | * calc_largest_patch_index\calc_largest_patch_index.ego | ||
| - | * calc_mean_patch_distances_and_standard_deviations\calc_mean_patch_nearest_centroid_distances_and_standard_deviations.ego | ||
| - | * calc_mean_patch_distances_and_standard_deviations\calc_mean_patch_nearest_distances_and_standard_deviations.ego | ||
| - | * calc_mean_patch_edges_and_standard_deviations\calc_mean_patch_edges_and_standard_deviations.ego | ||
| - | * calc_mean_patch_sizes_and_standard_deviations\calc_mean_patch_sizes_and_standard_deviations.ego | ||
| - | |||
| - | ==== Advanced Examples ==== | ||
| - | |||
| - | The examples below show how different model construction tecniques can be used to represent some specific concepts in Dinamica EGO. | ||
| - | |||
| - | === Local Saturation === | ||
| - | |||
| - | * simulate_deforestation_using_local_saturation.egoml | ||
| - | * simulate_deforestation_using_local_saturation_built_using_sub_regions.egoml | ||
| - | * simulate_deforestation_using_local_saturation_using_using_quadrants.egoml | ||
| - | |||
| - | === Multiple Parameters === | ||
| - | |||
| - | * simulate_deforestation_using_multiple_transition_matrix.egoml | ||
| - | * simulate_deforestation_using_multiple_transition_matrix_and_weights.egoml | ||
| - | |||
| - | === Sojourn Time === | ||
| - | |||
| - | * simulate_deforestation_and_abandonment.egoml | ||
| - | * simulate_deforestation_and_abandonment_using_sojourn_time.egoml | ||
| - | * simulate_def_aband_and_deterministic_transition.egoml | ||
| - | |||
| - | === Sub-Regions === | ||
| - | |||
| - | * determine_transition_matrix.egoml | ||
| - | * determine_weights_of_evidence_ranges_and_coefficients.egoml | ||
| - | * simulate_deforestation_using_sub_regions.egoml | ||
| - | * simulate_deforestation_using_sub_regions_and_saving_probability_maps.egoml | ||
| - | * simulate_deforestation_using_sub_regions_saving_sub_region_maps.egoml | ||
| - | | ||
| - | ===== Models distributed as part of Dinamica EGO's Examples and described in the Dinamica EGO guidebook ===== | ||
| - | |||
| - | === Lesson 1 === | ||
| - | |||
| - | * a_simple_model.egoml | ||
| - | |||
| - | === Lesson 2 === | ||
| - | |||
| - | * calc_forest_remaining_extent_per_state.egoml | ||
| - | |||
| - | === Lesson 3 === | ||
| - | |||
| - | * calc_forest_remaining_extent_per_state_using_subregions.egoml | ||
| - | |||
| - | === Lesson 4 === | ||
| - | * combine pathway.xml | + | * [[agent_based_model:start|Agent model of a rabbit population]] |
| - | * friction.egoml | + | |
| - | * join_towns.egoml | + | |
| - | * multiple_pathways.egoml | + | |
| - | * pathway.egoml | + | |
| - | + | ||
| - | === Lesson 5 === | + | |
| - | * MCE_part1&2&3&4&5&6.egoml | + | * [[habitat_suitability_modeling_with_small_sample_size|Evaluating Weights of Evidence method for habitat suitability modeling: a comparison with Maximum Entropy for a case of few presence records]] |
| - | * MCE_part1&2&3&4&5&6_complete.egoml | + | |
| - | * MCE_part1&2&3&4&5.egoml | + | |
| - | * MCE_part1&2&3&4.egoml | + | |
| - | * MCE_part1&2&3&4group.egoml | + | |
| - | * MCE_part1&2&3.egoml | + | |
| - | * MCE_part1&2.1.egoml | + | |
| - | * MCE_part1&2.egoml | + | |
| - | * MCE_part1&2complete.egoml | + | |
| - | * MCE_part1.egoml | + | |
| + | * [[intensity_analysis|Intensity Analysis]] | ||
| + | * [[roc_suite|Receiver Operating Characteristic (ROC) suite]] | ||